yuan1z0825/nature-skills

nature-data

Draft or audit manuscript Data/Code Availability statements, dataset access routes, repository plans, and FAIR metadata.

Quelltext ansehen

Verwendung

  1. Installationsbefehl kopieren und das Quellpaket vor der Installation in der eigenen Agentenumgebung prüfen.
  2. Benötigte Werkzeuge, Zugangsdaten und Hosts im Original prüfen.
  3. Eingabe und gewünschtes Ergebnis beschreiben und die Ausgabe mit den Quellen abgleichen.
npx skills add https://github.com/yuan1z0825/nature-skills --skill nature-data

Vor dem Start

  • Die Installation umfasst weder Modellabo noch API-Kontingent oder Dateizugriffsrechte.
  • Sterne und Installationen zeigen Aktivität, keine unabhängige Qualitäts- oder Sicherheitsprüfung.
Originales Skill-Dokument

Aus dem Quell-Repository gerendert; Überschriften, Beispiele, Code, Tabellen, Links und Bilder bleiben erhalten.

Nature Data Availability — Router

Routing protocol

For a new task, load the core and matching resources below. Reuse already loaded guidance on follow-ups; load more only when the task needs it.

1. Load the manifest and the core layer

Read manifest.yaml. Then read every file listed under always_load:

  • static/core/stance.md — what the data-availability package is, the default stance, and the source hierarchy.
  • static/core/workflow.md — the eight-step workflow and the output format.

2. No content axis — confirm journal and language inline

Unlike nature-writing or nature-figure, nature-data has no fragment axis. Its variation is handled at runtime, not by loading different content bodies:

  • journal/article type — if journal-specific instructions conflict with this skill, follow the journal.
  • access route — each dataset is classified into one route (public repository, controlled access, within paper, reused public, third-party restricted, justified request, or not applicable).
  • user language — if the user writes Chinese or requests Chinese guidance, read static/core/chinese-mode.md and add the 中文核对 block unless the user requested statement text only.

3. Run the workflow

For a wording edit or audit of one existing statement, preserve supplied repository identifiers and access conditions and check the affected claims. Report gaps relevant to that statement; do not require a full study-wide dataset inventory or repository redesign. Use the complete workflow below for a new data-sharing plan, full statement, or submission audit.

Follow the eight-step workflow in core/workflow.md: identify the journal, inventory every supporting dataset, classify each into one access route, choose repository and identifier strategy before drafting, draft the statement with explicit dataset-to-location mapping, add formal dataset citations, run the FAIR/metadata audit, and return ready-to-paste text plus unresolved fields.

Do not invent DOIs, accession numbers, repository names, licences, embargo dates, ethics approvals, access committees, or data-use conditions. Flag "available upon request" as weak unless there is a specific legal, ethical, commercial, or third-party restriction.

4. Reach for references only when needed

The files under references/ are deep references, not defaults. Open them on demand per the references.on_demand table in the manifest — for example references/policy-principles.md for the governing rules and edge cases, references/repository-and-identifiers.md for repository/accession/DOI choices, references/statement-patterns.md for ready-to-adapt statements, references/fair-metadata-checklist.md for the FAIR audit, references/chinese-author-alignment.md for Chinese wording, and references/source-basis.md to justify a rule with its official source.

When the target is the flagship journal Nature, also open references/nature-article-requirements.md for statement placement, mandatory-deposition routing, central-code review access, materials and structure-file checks.

When the target is Nature Machine Intelligence, open ../nature-shared/journal-formats/nature-machine-intelligence.md. Enforce a Data Availability statement and a separate Code availability section after it and before references; check reviewer access, precise restrictions, repository/identifier quality and the Software Submission Checklist for newly developed central code.

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